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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACCGGCTTATTACGCCGCGTGTACCGTCGGAGGGACCCTTTGCTGTGGTCTCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttcgattttcatttcgtctcattttcatttatgtttccttgtttatcgaccacgattttgatttggtttcgtttggattgatgtttgaaactg...

Basic information

species Vitis vinifera
transcript Vv17s0000g00400.t01
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110719184|gb|EE096873.1|EE096873
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110713202|gb|EE088917.1|EE088917
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTAAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110711573|gb|EE088206.1|EE088206
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGCGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110720504|gb|EE096482.1|EE096482
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|161706989|gb|FC055097.1|FC055097
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCT
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCT
EST: gi|161711833|gb|FC059162.1|FC059162
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|294966537|gb|GW837672.1|GW837672
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110711654|gb|EE088383.1|EE088383
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|34547671|gb|CF515903.1|CF515903
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110723052|gb|EE099922.1|EE099922
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|30305606|gb|CB982400.1|CB982400
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110728772|gb|EE104635.1|EE104635
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110712086|gb|EE089303.1|EE089303
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|160482081|gb|EY255058.1|EY255058
EST:     GTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: GTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|37187651|gb|CF607004.1|CF607004
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110720231|gb|EE095970.1|EE095970
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|27584616|gb|CB007311.1|CB007311
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110718487|gb|EE095376.1|EE095376
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110712436|gb|EE090053.1|EE090053
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110711363|gb|EE087760.1|EE087760
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|161719057|gb|FC066039.1|FC066039
EST:     CATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: CATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|34544432|gb|CF512664.1|CF512664
EST:     TCACTCACACGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|161717979|gb|FC069268.1|FC069268
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAT                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110411522|gb|EC977239.1|EC977239
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|161705703|gb|FC056209.1|FC056209
EST:     TC-CTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|30133244|gb|CB918583.1|CB918583
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110719634|gb|EE094933.1|EE094933
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCTTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|22010906|gb|BQ795940.1|BQ795940
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110712546|gb|EE090291.1|EE090291
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110708025|gb|EE085098.1|EE085098
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110712352|gb|EE089873.1|EE089873
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110732771|gb|EE108347.1|EE108347
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|161721484|gb|FC070462.1|FC070462
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110685556|gb|EE062378.1|EE062378
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGGACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110713623|gb|EE089716.1|EE089716
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110720655|gb|EE096765.1|EE096765
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110711156|gb|EE087371.1|EE087371
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110718257|gb|EE094882.1|EE094882
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110718491|gb|EE095388.1|EE095388
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110711453|gb|EE087950.1|EE087950
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|161713071|gb|FC062152.1|FC062152
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|161708269|gb|FC057011.1|FC057011
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|110719629|gb|EE094922.1|EE094922
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
EST: gi|30125186|gb|CB910525.1|CB910525
EST:     TCACTCACATGGCCGTTACTCCTCTCGATCTCGTCAAGTGTAATATGCAG                         ATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC
genomic: TCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttc ... ggtcttgcagATTGACCCTACAAAGTACAAGAGCATCTCTTCTGGATTTGGAGTATTACTC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACCGGCTTATTACGCCGCGTGTACCGTCGGAGGGACCCTTTGCTGTGGTCTCACTCACATGGCCGTTACTCCTCTCGATCTCGTGAAGTGTAATATGCAGgtgtgttttcgattttcatttcgtctcattttcatttatgtttccttgtttatcgaccacgattttgatttggtttcgtttggattgatgtttgaaactg

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC