Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|71871396|gb|DT020451.1|DT020451EST: TGGCTCTTGTAGTTCTTGATTTCAAGGATGCTCGGCCTTCCCTAGAGAAG GTCTCCTATTCCCTTTTGATTTTCTTCTGCGGAATGTTCATTACAGTTGAT
genomic: TGGCTCTTGTAGTTCTTGATTTCAAGGATGCTCGGCCTTCCCTAGAGAAGgtaaaatcag ... ctttgatcagGTCTCCTATTCCCTTTTGATTTTCTTCTGCGGAATGTTCATTACAGTTGAT
EST:
gi|110360567|gb|EC923780.1|EC923780EST: TGGCTCTTGTAGTTCTTGATTTCAAGGATGCTCGGCCTTCCCTAGAGAAG GTCTCCTATTCCCTTTTGATTTTCTTCTGCGGAATGTTCATTACAGTTGAT
genomic: TGGCTCTTGTAGTTCTTGATTTCAAGGATGCTCGGCCTTCCCTAGAGAAGgtaaaatcag ... ctttgatcagGTCTCCTATTCCCTTTTGATTTTCTTCTGCGGAATGTTCATTACAGTTGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTCTTTGCTCATGGGTCTCAATATGTCATGGACTGCAATTGCTGCTGCACTGGCTCTTGTAGTTCTTGATTTCAAGGATGCTCGGCCTTCCCTAGAGAAGgtaaaatcagcaatacaatgcttaacttttattttcatacagagattgatgaatacttgattataatttatttgttggagaaagaaaaaactctaaaaagttctatttctcatctttgatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG