Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|77578081|gb|DV217805.1|DV217805EST: GTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGG GCAAGTGTACCAGGACTACTGTGAGGCCATGAGCACGCTTTCCCTTGTGAT
genomic: GTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGGgtactaagaa ... ttgtgggcagGCAAGTGTACCAGGACTACTGTGAGGCCATGAGCACGCTTTCCCTTGTGAT
EST:
gi|110382995|gb|EC947330.1|EC947330EST: GTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGG GCAAGTGTACCAGGACTACTGTGAGGCCATGAGCACGCTTTCCCTTGTGAT
genomic: GTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGGgtactaagaa ... ttgtgggcagGCAAGTGTACCAGGACTACTGTGAGGCCATGAGCACGCTTTCCCTTGTGAT
EST:
gi|29784313|gb|CB344874.2|CB344874EST: GTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGG GCAAGTGTACCAGGACTACTGTGAGGCCATGAGCACGCTTTCCCTTGTGAT
genomic: GTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGGgtactaagaa ... ttgtgggcagGCAAGTGTACCAGGACTACTGTGAGGCCATGAGCACGCTTTCCCTTGTGAT
EST:
gi|29784383|gb|CB345036.2|CB345036EST: GTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGG GCAAGTGTACCAGGACTACTGTGAGGCCATGAGCACGCTTTCCCTTGTGAT
genomic: GTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGGgtactaagaa ... ttgtgggcagGCAAGTGTACCAGGACTACTGTGAGGCCATGAGCACGCTTTCCCTTGTGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AAGAGACCCTTTCTTTCAGCTATTCAGCTGAGAAGAAGTCATCCAATGCTGTGCAGGAGTATTTCCTCAACAAAATGGGTGAAGATTTCAGTGAATTCGGgtactaagaactaagaacatgaccattgtgatccttttcctttctattctgtttttttgctttgctgttaccgacttaaataaacatgtactttttttcttatttttttgtcttgtgggcag
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