Sequence
atgc intronic sequence ATGC exonic sequenceTGAGGTGTTATGACCAGTCCGGCGATGCCGGCGGGGAGAGTCCGGCGGAGAGTGGGAACTACAAGGTGTTGAAGAACAGGCGGGGCTGTTACAAGAGGAGgtgatccatctatacatatatctttcatgggtgaacactatttttaaagtttgtgtgttgatttggaattcatgaaagtgggactgatttgattttcgtttttgctgcag
Basic information
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|349809970|gb|FQ398595.1|FQ398595EST: AGTGGGAACTACAAGGTGTTGAAGAACAGGCTGGGCTGTTACAAGAGGAG AAAAAATTCTGAAACATGGACTGCGGTCTCCTCCACTATAGAAGATGGCCA
genomic: AGTGGGAACTACAAGGTGTTGAAGAACAGGCGGGGCTGTTACAAGAGGAGgtgatccatc ... tttgctgcagAAAAAATTCTGAAACATGGACTGCGGTCTCCTCCACTATAGAAGATGGCCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGAGGTGTTATGACCAGTCCGGCGATGCCGGCGGGGAGAGTCCGGCGGAGAGTGGGAACTACAAGGTGTTGAAGAACAGGCGGGGCTGTTACAAGAGGAGgtgatccatctatacatatatctttcatgggtgaacactatttttaaagtttgtgtgttgatttggaattcatgaaagtgggactgatttgattttcgtttttgctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG