1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATTGAGCTTGTACCTCAGTTAGGACGACCTTCTAAAGATTATCCTGACAAGAAGAAACTATTCTCTGTTCAGGATTTCTTCAGATACACAGAATCAGAAGgtatgtggtagcttggtataatattggaaattactttgttcttctattgcacaacattgtgaagtacaattgtacatcctccggcaggagtttctattga...
species | Vitis vinifera |
transcript | Vv13s0019g03870.t01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GAAGAAACTATTCTCTGTTCAGGATTTCTTCAGATACACAGAATCAGAAG GAAGGCGGTTCTTTGAAGAGCTGGATAGAGATGGTGATGGTCAAGTAACATEST: gi|27580142|gb|CB002837.1|CB002837
genomic: GAAGAAACTATTCTCTGTTCAGGATTTCTTCAGATACACAGAATCAGAAGgtatgtggta ... attcttatagGAAGGCGGTTCTTTGAAGAGCTGGATAGAGATGGTGATGGTCAAGTAACAT
EST: GAAGAAACTATTCTCTGTTCAGGATTTCTTCAGATACACAGAATCAGAAG GAAGGCGGTTCTTTGAAGAGCTGGATAGAGATGGTGATGGTCAAGTAACAT
genomic: GAAGAAACTATTCTCTGTTCAGGATTTCTTCAGATACACAGAATCAGAAGgtatgtggta ... attcttatagGAAGGCGGTTCTTTGAAGAGCTGGATAGAGATGGTGATGGTCAAGTAACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGAGCTTGTACCTCAGTTAGGACGACCTTCTAAAGATTATCCTGACAAGAAGAAACTATTCTCTGTTCAGGATTTCTTCAGATACACAGAATCAGAAGgtatgtggtagcttggtataatattggaaattactttgttcttctattgcacaacattgtgaagtacaattgtacatcctccggcaggagtttctattga
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttggaaa