Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|110397498|gb|EC963241.1|EC963241EST: CAACTGCCTTTTCAGCTGCACCCAGTACATCTGCCCTGACTTTGGCACTG ATCCAAATACTGATCCAAAGAAGGTACAGAAGTGTCTCAACAAATGCTATG
genomic: CAACTGCCTTTTCAGCTGCACCCAGTACATCTGCCCTGACTTTGGCACTGgtataaaaac ... gtcgttgcagATCCAAATACTGATCCAAAGAAGGTACAGAAGTGTCTCAACAAATGCTATG
EST:
gi|110394854|gb|EC960219.1|EC960219EST: CAACTGCCTTTTCAGCTGCACCCAGTACATCTGCCCTGACTTTGGCACTG ATCCAAATACTGATCCAAAGAAGGTACAGAAGTGTCTCAACAAATGCTATG
genomic: CAACTGCCTTTTCAGCTGCACCCAGTACATCTGCCCTGACTTTGGCACTGgtataaaaac ... gtcgttgcagATCCAAATACTGATCCAAAGAAGGTACAGAAGTGTCTCAACAAATGCTATG
EST:
gi|28971063|gb|CB350096.1|CB350096EST: CAACTGCCTTTTCAGCTGCACCCAGTACATCTGCCCTGACTTTGGCACTG ATCCAAATACTGATCCAAAGAAGGTACAGAAGTGTCTCAACAAATGCTATG
genomic: CAACTGCCTTTTCAGCTGCACCCAGTACATCTGCCCTGACTTTGGCACTGgtataaaaac ... gtcgttgcagATCCAAATACTGATCCAAAGAAGGTACAGAAGTGTCTCAACAAATGCTATG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGTTCAAACAAATGCACTAAGGGCGGCCCCTCCGTCCCAGATGCCCTCTGCAACTGCCTTTTCAGCTGCACCCAGTACATCTGCCCTGACTTTGGCACTGgtataaaaaccaagcctctctctctctctctctcagtctctcatttcaattataacatactcatctaagcattattattgtcgttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC