1 5' 3' |
TGAAGATGGATAAAAGCATGCTAGGAGACTTGGACTCTCTTCCCGAGGAAGCTAAGCTCCGAATGTCTGCTATGATCGACCAGCTCCAGATCCGCGACAGgttctctctctaaatgtctcggttaattgaattggatggtgttctaatatttgttttctgtatttgtttcaatttgtatgcatggtgctattctgtggag...
species | Vitis vinifera |
transcript | Vv08s0007g00350.t01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCTAAGCTCCGAATGTCTGCTATGATCGACCAGCTCCAGATCCGCGACAG TCTAAGGATGTACAATTCATTGGTGGAGAGATGTTTCACCGATTGTGTTGAEST: gi|110383227|gb|EC947585.1|EC947585
genomic: GCTAAGCTCCGAATGTCTGCTATGATCGACCAGCTCCAGATCCGCGACAGgttctctctc ... aacattgcagTCTAAGGATGTACAATTCATTGGTGGAGAGATGTTTCACCGATTGTGTTGA
EST: GCTAAGCTCCGAATGTCTGCTATGATCGACCAGCTCCAGATCCGCGACAG TCTAAGGATGTACAATTCATTGGTGGAGAGATGTTTCACCGATTGTGTTGA
genomic: GCTAAGCTCCGAATGTCTGCTATGATCGACCAGCTCCAGATCCGCGACAGgttctctctc ... aacattgcagTCTAAGGATGTACAATTCATTGGTGGAGAGATGTTTCACCGATTGTGTTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAAGATGGATAAAAGCATGCTAGGAGACTTGGACTCTCTTCCCGAGGAAGCTAAGCTCCGAATGTCTGCTATGATCGACCAGCTCCAGATCCGCGACAGgttctctctctaaatgtctcggttaattgaattggatggtgttctaatatttgttttctgtatttgtttcaatttgtatgcatggtgctattctgtggag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaattgga