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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGCCAAAATGGCGCACACATGCGTCGCATTCAATTCTCTCATCTTCTCCTCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttttcctatccctcttttctcttccgtttccgtatatgtgttttttttaactgaccgtttggttgatgagacaagttagggaaagtgtgagaa...

Basic information

species Vitis vinifera
transcript Vv07s0005g01530.t01
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71876215|gb|DT025270.1|DT025270
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351029243|gb|FQ435443.1|FQ435443
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|32272142|gb|CD721301.1|CD721301
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|110707589|gb|EE084158.1|EE084158
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351038598|gb|FQ464464.1|FQ464464
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351024186|gb|FQ423609.1|FQ423609
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351022198|gb|FQ438783.1|FQ438783
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351048211|gb|FQ442181.1|FQ442181
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349815979|gb|FQ403620.1|FQ403620
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|352798651|gb|FQ480676.1|FQ480676
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349824782|gb|FQ414640.1|FQ414640
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351021593|gb|FQ429697.1|FQ429697
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349814012|gb|FQ414246.1|FQ414246
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351054329|gb|FQ450412.1|FQ450412
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|110691867|gb|EE070457.1|EE070457
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351024764|gb|FQ430589.1|FQ430589
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349822594|gb|FQ412858.1|FQ412858
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351031646|gb|FQ459903.1|FQ459903
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|352794509|gb|FQ481742.1|FQ481742
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351047968|gb|FQ441140.1|FQ441140
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351056306|gb|FQ454167.1|FQ454167
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|37188653|gb|CF608002.1|CF608002
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351047409|gb|FQ451921.1|FQ451921
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|352798669|gb|FQ480694.1|FQ480694
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351030360|gb|FQ432298.1|FQ432298
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351021990|gb|FQ437777.1|FQ437777
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|71875459|gb|DT024514.1|DT024514
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349820976|gb|FQ408684.1|FQ408684
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|32249589|gb|CD715408.1|CD715408
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349817517|gb|FQ407307.1|FQ407307
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|110697956|gb|EE075414.1|EE075414
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349821228|gb|FQ408815.1|FQ408815
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|110712884|gb|EE088319.1|EE088319
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351049128|gb|FQ449850.1|FQ449850
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351027334|gb|FQ444583.1|FQ444583
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349826886|gb|FQ418977.1|FQ418977
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351029664|gb|FQ427504.1|FQ427504
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|110709053|gb|EE084177.1|EE084177
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349826319|gb|FQ416124.1|FQ416124
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTG-AAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351016793|gb|FQ424220.1|FQ424220
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351037597|gb|FQ462580.1|FQ462580
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349811409|gb|FQ407635.1|FQ407635
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349826256|gb|FQ416061.1|FQ416061
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351012618|gb|FQ430181.1|FQ430181
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|71859900|gb|DT008955.1|DT008955
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349825647|gb|FQ421746.1|FQ421746
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGCTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349825899|gb|FQ423194.1|FQ423194
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351023787|gb|FQ448338.1|FQ448338
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349811516|gb|FQ409512.1|FQ409512
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349810214|gb|FQ401660.1|FQ401660
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|32267449|gb|CD716412.1|CD716412
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349826725|gb|FQ418816.1|FQ418816
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|110371862|gb|EC935988.1|EC935988
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|27582740|gb|CB005435.1|CB005435
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351040704|gb|FQ438248.1|FQ438248
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351051863|gb|FQ455277.1|FQ455277
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349812565|gb|FQ407184.1|FQ407184
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349817148|gb|FQ405153.1|FQ405153
EST:     TCAAACCCTACTTCTCCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349819343|gb|FQ412237.1|FQ412237
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|27586643|gb|CB009338.1|CB009338
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351025638|gb|FQ426652.1|FQ426652
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|32270269|gb|CD719428.1|CD719428
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|110719511|gb|EE094705.1|EE094705
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351032416|gb|FQ461669.1|FQ461669
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351037939|gb|FQ465177.1|FQ465177
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGC
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|294965795|gb|GW837278.1|GW837278
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATCTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|29781903|gb|CB346733.2|CB346733
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|110702673|gb|EE078851.1|EE078851
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349818345|gb|FQ409120.1|FQ409120
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|161712676|gb|FC062248.1|FC062248
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349830682|gb|FQ416980.1|FQ416980
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349812329|gb|FQ406350.1|FQ406350
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349807180|gb|FQ401172.1|FQ401172
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|34544144|gb|CF512376.1|CF512376
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|110385597|gb|EC950139.1|EC950139
EST:     TTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGAC-TCGGGGTTGCGCCAG
genomic: TTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTC-GGGTTGCGCCAG
EST: gi|28962584|gb|CB341617.1|CB341617
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351048277|gb|FQ442247.1|FQ442247
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTCCAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349829184|gb|FQ419680.1|FQ419680
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|161707952|gb|FC056972.1|FC056972
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|352798620|gb|FQ480645.1|FQ480645
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351033794|gb|FQ447832.1|FQ447832
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|351023555|gb|FQ432938.1|FQ432938
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
EST: gi|349828833|gb|FQ419166.1|FQ419166
EST:     TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAG                         GAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT
genomic: TCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttt ... cgattggcagGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGCCAGT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGGCCAAAATGGCGCACACATGCGTCGCATTCAATTCTCTCATCTTCTCCTCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTTCTTTTTCCTCTAGgtttgtgttttcctatccctcttttctcttccgtttccgtatatgtgttttttttaactgaccgtttggttgatgagacaagttagggaaagtgtgagaa

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccctctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctcttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gagacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - agggaaa