1 5' 3' |
GGGAAATAAGATCCCAGCTCCCAGACTGTTGAAGCTGACTCCTGTTGATTCACATATGGCTGGGGTGGATAATAAATTTCACGGTGGCCAATTTTCATGGgtaagttgattcatgtcttccatatttcatgctatgtcttgcttgatccatacatttctatcttggtcatttaaatttggctgataagagcttacatgat...
species | Vitis vinifera |
transcript | Vv03s0063g00480.t01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CACATATGGCTGGGGTGGATAATAAATTTCACGGTGGCCAATTTTCATGG GTGACTGAGAATGGGAAACAAGAGCGGCATCTAGTTGCAACAGTGGGCAAGEST: gi|161716247|gb|FC066849.1|FC066849
genomic: CACATATGGCTGGGGTGGATAATAAATTTCACGGTGGCCAATTTTCATGGgtaagttgat ... gtatttccagGTGACTGAGAATGGGAAACAAGAGCGGCATCTAGTTGCAACAGTGGGCAAG
EST: CACATATGGCTGGGGTGGATAATAAATTTCACGGTGGCCAATTTTCATGG GTGACTGAGAATGGGAAACAAGAGCGGCATCTAGTTGCAACAGTGGGCAAG
genomic: CACATATGGCTGGGGTGGATAATAAATTTCACGGTGGCCAATTTTCATGGgtaagttgat ... gtatttccagGTGACTGAGAATGGGAAACAAGAGCGGCATCTAGTTGCAACAGTGGGCAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGAAATAAGATCCCAGCTCCCAGACTGTTGAAGCTGACTCCTGTTGATTCACATATGGCTGGGGTGGATAATAAATTTCACGGTGGCCAATTTTCATGGgtaagttgattcatgtcttccatatttcatgctatgtcttgcttgatccatacatttctatcttggtcatttaaatttggctgataagagcttacatgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gataaga