1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTGATCTGGGGTTTGGTGAAAATGAGTGGAGCTGTGCTTGTGGCGATTGCTGCTGCTGTGGGAAACTTGTTGCAAGGATGGGATAACGCTACGATTGCTGgtaatagatttttcctctcccaactactctgtttgttcctttgttctaaaggttctttactgtcgttggcatccagaatcaattcttttatcttgtgggt...
species | Vitis vinifera |
transcript | Vv03s0038g03940.t01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGCTGCTGTGGGAAACTTGTTGCAAGGATGGGATAACGCTACGATTGCTG GGGCTGTTCTATTCATCAAGAAGGAATTCAACTTGCAAGGTGAACCCACTG
genomic: TGCTGCTGTGGGAAACTTGTTGCAAGGATGGGATAACGCTACGATTGCTGgtaatagatt ... tctgctgcagGGGCTGTTCTATACATCAAGAAGGAATTCAACTTGCAAGGTGAACCCACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGATCTGGGGTTTGGTGAAAATGAGTGGAGCTGTGCTTGTGGCGATTGCTGCTGCTGTGGGAAACTTGTTGCAAGGATGGGATAACGCTACGATTGCTGgtaatagatttttcctctcccaactactctgtttgttcctttgttctaaaggttctttactgtcgttggcatccagaatcaattcttttatcttgtgggt
- - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaatcaa