Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|110356770|gb|EC919841.1|EC919841EST: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTC GGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
genomic: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTCgtaagccctt ... tgcatgacagGGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
EST:
gi|161712668|gb|FC062240.1|FC062240EST: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTC GGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
genomic: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTCgtaagccctt ... tgcatgacagGGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
EST:
gi|110703227|gb|EE079888.1|EE079888EST: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTC GGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
genomic: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTCgtaagccctt ... tgcatgacagGGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
EST:
gi|110412485|gb|EC978235.1|EC978235EST: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTC GGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
genomic: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTCgtaagccctt ... tgcatgacagGGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
EST:
gi|110385297|gb|EC949807.1|EC949807EST: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTC GGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
genomic: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTCgtaagccctt ... tgcatgacagGGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
EST:
gi|110373094|gb|EC937304.1|EC937304EST: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTC GGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
genomic: GTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTCgtaagccctt ... tgcatgacagGGTACAATAGTTACAGATGATCGAAATGCTACCTACTGTGTTTACAACTCT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGGAGAAGGAAAGGGTTCCACTCTAGTCCATCTAGTTGTGGTGGTTCTGAGTCTCGTCGCCTTTGGCTTTGCCGTTGCTGCTGAGCGCCGCAGAAGCGTCgtaagcccttctttgtctttattactctttcaactgtgatccaagtcagggttttgttatgcgcatttcgctcttgcattttgtactttggtttctgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC