Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|32249457|gb|CD715276.1|CD715276EST: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAG GTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
genomic: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAGgtatcatgtt ... gttttttcagGTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
EST:
gi|30324324|gb|CD007586.1|CD007586EST: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAG GTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
genomic: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAGgtatcatgtt ... gttttttcagGTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
EST:
gi|110722778|gb|EE099336.1|EE099336EST: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAG GTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
genomic: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAGgtatcatgtt ... gttttttcagGTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
EST:
gi|32248274|gb|CD714093.1|CD714093EST: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAG GTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
genomic: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAGgtatcatgtt ... gttttttcagGTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
EST:
gi|32269112|gb|CD718271.1|CD718271EST: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAG GTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
genomic: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAGgtatcatgtt ... gttttttcagGTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
EST:
gi|110703768|gb|EE080905.1|EE080905EST: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAG GTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
genomic: TGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAGgtatcatgtt ... gttttttcagGTGGCAGAGAGAGCTTTGTTCCTATGGAATAATGGTCACATTGAGAACTTA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGAAGAAATTTTAGAAGCAACCCAGCCAGCAGAATTCCAGCGCTGTATGGTGCCCTTGTTTCACCAAATTGCTCGTTGCTTGAACAGCTCACACTTCCAGgtatcatgttttaaatgtttcttgctgttctgtctcaatctatccactaatttctgtgcaaatgcatttctgttctggcatatgtttcaaatgttgaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA