Sequence
atgc intronic sequence ATGC exonic sequenceCGACAGTCGAGACCTAACTCGAATAGAGCGTATAGGCGCTCACTCACACATCCGCGGCCTTGGTCTCGACTCTGCCCTAGAACCTCGTGCTGTTTCTGAAgcatggtggggccaaacctcctgcccgcaagagccgccggtgtcatccctccagatgattaaagaaaggcaaaaattgctggtcggtgctgtccttcctc...
Basic information
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|71859970|gb|DT009025.1|DT009025EST: TCCGCGGCCTTGGTCTCGACTCTGCCCTAGAACCTCGTGCTGTTTCTGAG GGCATGGTGGGCCAGACCTCTGCCCGCAAAGCCGCCGG-TGTCATC
genomic: TCCGCGGCCTTGGTCTCGACTCTGCCCTAGAACCTCGTGCTGTTTCTGAAgcatggtggg ... tgtttctgagGGCATGGTGGGCCAGACCTCTGCCCGCAAAGCCGCCGGGTGTCATC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CGACAGTCGAGACCTAACTCGAATAGAGCGTATAGGCGCTCACTCACACATCCGCGGCCTTGGTCTCGACTCTGCCCTAGAACCTCGTGCTGTTTCTGAAgcatggtggggccaaacctcctgcccgcaagagccgccggtgtcatccctccagatgattaaagaaaggcaaaaattgctggtcggtgctgtccttcctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tccctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gcaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tccttcc