1 5' 3' | 2 5' 3' | 3 5' 3' |
TCTGAAAATGAGAGAGTGCATTTCGATTCACATCGGCCAGGCCGGTATTCAGGTCGGCAATGCGTGCTGGGAACTATACTGCCTCGAGCATGGCATTCAGgtaacgaaacgacattttcgtttttcaattcgatggtttctccttcaaatttcctctttcactccatttccctgtatttcattagatcttggttttgttg...
species | Vitis vinifera |
transcript | Vv00s0373g00010.t01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGGTCGGCAATGCGTGCTGGGAACTATACTGCCTCGAGCATGGCATTCAG CCTGATGGCCAGATGCCAAGTGACAAGACCATTNNNNNNNNAGATGATGCTEST: gi|161712940|gb|FC062066.1|FC062066
genomic: AGGTCGGCAATGCGTGCTGGGAACTATACTGCCTCGAGCATGGCATTCAGgtaacgaaac ... ccttttacagCCTGATGGCCAGATGCCAAGTGACAAGACCATTGGGGGGGGAGATGATGCT
EST: AGGTCGGCAATGCGTGCTGGGAACTATACTGCCTCGAGCATGGCATTCAG CCTGATGGCCAGATGCCAAGTGACAAGACCATTGGAGGGGGAGATGATGCT
genomic: AGGTCGGCAATGCGTGCTGGGAACTATACTGCCTCGAGCATGGCATTCAGgtaacgaaac ... ccttttacagCCTGATGGCCAGATGCCAAGTGACAAGACCATTGGGGGGGGAGATGATGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTGAAAATGAGAGAGTGCATTTCGATTCACATCGGCCAGGCCGGTATTCAGGTCGGCAATGCGTGCTGGGAACTATACTGCCTCGAGCATGGCATTCAGgtaacgaaacgacattttcgtttttcaattcgatggtttctccttcaaatttcctctttcactccatttccctgtatttcattagatcttggttttgttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaacga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccttc