Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|27581698|gb|CB004393.1|CB004393EST: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTG ATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
genomic: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTGgtaggtagca ... ctttctgcagATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
EST:
gi|161720703|gb|FC070629.1|FC070629EST: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTG ATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
genomic: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTGgtaggtagca ... ctttctgcagATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
EST:
gi|161713350|gb|FC063361.1|FC063361EST: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTG ATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
genomic: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTGgtaggtagca ... ctttctgcagATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
EST:
gi|71876591|gb|DT025646.1|DT025646EST: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTG ATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
genomic: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTGgtaggtagca ... ctttctgcagATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
EST:
gi|71876309|gb|DT025364.1|DT025364EST: AGGAGAAAGCAGAAAAGTCGATGCTCGAAGCTATGCCTCAGGATATTTTG ATTAGGATATTGTGTGGTGTGGATCATGATGATTTAAAGCAGCTTTTCCAT
genomic: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTGgtaggtagca ... ctttctgcagATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
EST:
gi|26261757|gb|CA812820.1|CA812820EST: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTGTGCCTCAGGATATTT-G ATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
genomic: AGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTGgtaggtagca ... ctttctgcagATTAGGATATTGTGTGGTGTGGATCATGATGATTTGAAGCAGCTTTTCCAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAGTTCTGTTCTCAGGACTCCATTGAAGAGGAGATGCGGCGAAATGGTGGAGGAGAAAGCAGAAAAGTCGATGCTTGAAGCTATGCCTCAGGATATTTTGgtaggtagcagatttatgaatttaacttctattgatatttttagatttgattgaatcaattttttattaatttaccttctattgatgttttagatttgattgaatgattttttattaatcataggatttcctttctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC