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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGAATAACTACCATCGAAATGGCAAAGGGTGAACCGCCTTTTGCCGATTTACATCCCATGAGAGTTCTTTTTTTGATTCCTAAAAATAATCCGCCACAGgtgcgtctctttctaaaacgctttagcatttaattttcggcatatgcag

Basic information

species Selaginella moellendorffii
transcript EFJ32910
intron # 9
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ32910 (Selaginella moellendorffii), 5'ss of exon 9
lower sequence: LOC_Os07g32400.2 (Oryza sativa), 5'ss of exon 9
TGGAATAACTACCATCGAAATGGCAAAGGGTGAACCGCCTTTTGCCGATTTACATCCCATGAGAGTTCTTTTTTTGATTCCTAAAAATAATCCGCCACAGgtgc----gtctctttctaaaacg----ctttagcatttaattttcggcatatgcag-----------------------------------------------------
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AGGTATAACTGCTATTGAAATGGCAAAAGGTGAACCCCCTTTGGCAGATATCCATCCCATGAGAGTTCTTTTCATGATACCTCGTGAAAATCCTCCTCAGgtcacttggttaatcttcaatccctgttctttaatgcttaattg-caatatacgcaaagcatttgctttgatccactagaatatagtatattaatttttaaaaaatgcag