1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATAACGGGCAGCTCGAGTTCTACAATGTTGATGATCTCGAGACTATGGCAACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctcttctgaaacgaacttatccttaccaccggtcgtttgcag
species | Selaginella moellendorffii |
transcript | EFJ13839 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169028106|gb|FE435958.1|FE435958
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169112794|gb|FE515170.1|FE515170
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169095107|gb|FE499069.1|FE499069
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169055801|gb|FE466706.1|FE466706
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169087370|gb|FE492199.1|FE492199
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAACGGGCAGCTCGAGTTCTACAATGTTGATGATCTCGAGACTATGGCAACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctcttctgaaacgaacttatccttaccaccggtcgtttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG