1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATAACGGGCAGCTCGAGTTCTACAATGTTGATGATCTCGAAACTATGGCAACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctcttctgaaacgaacttatccttaccactggtcgtttgcag
species | Selaginella moellendorffii |
transcript | EFJ12681 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169093492|gb|FE495747.1|FE495747
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169093491|gb|FE495746.1|FE495746
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169027754|gb|FE434566.1|FE434566
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169030829|gb|FE436810.1|FE436810
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCATEST: gi|169030051|gb|FE440517.1|FE440517
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
EST: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAG ATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
genomic: ACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctctt ... tcgtttgcagATATGTGGCTACTTCTGTTACTTCCGTGCACCAAATGGAGAACGGCTTCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAACGGGCAGCTCGAGTTCTACAATGTTGATGATCTCGAAACTATGGCAACGGCAGAGCATTTCATGGCAACTGATGTGGATTGGGATCCCGCTGGAAGgtaagctcttctgaaacgaacttatccttaccactggtcgtttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG