1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GTATGAGCTTCCAGATCACCATCCGCTGGTTCAACAGgtttattgattcatgcaaggtgttgataattgactcggaggtgtgaaaatgttgcag
species | Selaginella moellendorffii |
transcript | EFJ08215 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GTATGAGCTTCCAGATCACCATCCGCTGGTTCAACAG CTGGAACCCAGGGAGAAAGACGACCCTTGTTTCTACTTACTGGCACTATGGEST: gi|169077269|gb|FE485155.1|FE485155
genomic: GTATGAGCTTCCAGATCACCATCCGCTGGTTCAACAGgtttattgat ... aatgttgcagCTGGAACCCAGGGAGAAAGACGACCCTTGTTTCTACTTACTGGCACTATGG
EST: GTATGAGCTTCCAGATCACCATCCGCTGGTCCAACAG CTGGAACCGAGGGAGAAAGACGACCCTTGTTTTTACTTACTGGCCCTATGGEST: gi|169110368|gb|FE512127.1|FE512127
genomic: GTATGAGCTTCCAGATCACCATCCGCTGGTTCAACAGgtttattgat ... aatgttgcagCTGGAACCCAGGGAGAAAGACGACCCTTGTTTCTACTTACTGGCACTATGG
EST: GTATGAGCTTCCAGATCACCATCCGCTGGTTCAACAG CTGGAACCCAGGGAGAAAGACGACCCTTGTTTCTACTTACTGGCACTATGGEST: gi|169044209|gb|FE452939.1|FE452939
genomic: GTATGAGCTTCCAGATCACCATCCGCTGGTTCAACAGgtttattgat ... aatgttgcagCTGGAACCCAGGGAGAAAGACGACCCTTGTTTCTACTTACTGGCACTATGG
EST: GTATGAGCTTCCAGATCACCATCCGCTGGTCCAACAG CTGGAACCGAGGGAGAAAGACGACCCTTGTTTCTACTTACTGGCACTATGGEST: gi|169064930|gb|FE475626.1|FE475626
genomic: GTATGAGCTTCCAGATCACCATCCGCTGGTTCAACAGgtttattgat ... aatgttgcagCTGGAACCCAGGGAGAAAGACGACCCTTGTTTCTACTTACTGGCACTATGG
EST: GTATGAGCTTCCAGATCACCATCCGCTGGTCCAACAG CTGGAACCGAGGGAGAAAGACGACCCTTGTTTCTACTTACTGGCACTATGG
genomic: GTATGAGCTTCCAGATCACCATCCGCTGGTTCAACAGgtttattgat ... aatgttgcagCTGGAACCCAGGGAGAAAGACGACCCTTGTTTCTACTTACTGGCACTATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATGAGCTTCCAGATCACCATCCGCTGGTTCAACAGgtttattgattcatgcaaggtgttgataattgactcggaggtgtgaaaatgttgcag
- - GAGCTT
- - - - - - AGATCA