1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GACACCGAAGATGTGTGCAATGCATCACGACGAAACCTCTGATTTGCACGAAGTTGGGAGAATACTCTCGGAATCTATCGGGgtaagctgtccggacgacaaagtttagcttagtcacattctgatatcttttgtttttccag
species | Selaginella moellendorffii |
transcript | EFJ23780 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AAACCTCTGATTTGCACGAAGTTGGGAGAATACTCTCGGAATCTATCGGG GTGGACGACACTTCTCTGGAAGTCCGGCAGCTAGTAGTCGAAGTTTGCGAGEST: gi|169036443|gb|FE443533.1|FE443533
genomic: AAACCTCTGATTTGCACGAAGTTGGGAGAATACTCTCGGAATCTATCGGGgtaagctgtc ... gtttttccagGTGGACGACACTTCTCTGGAAGTCCGGCAGCTAGTAGTCGAAGTTTGCGAG
EST: AAACCTCTGATTTGCACGAAGTTGGGAGAATACTCTCGGAATCTATCGGG GTGGACGACACTTCTCTGGAAGTCCGGCAGCTAGTAGTCGAAGTTTGCGAG
genomic: AAACCTCTGATTTGCACGAAGTTGGGAGAATACTCTCGGAATCTATCGGGgtaagctgtc ... gtttttccagGTGGACGACACTTCTCTGGAAGTCCGGCAGCTAGTAGTCGAAGTTTGCGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACACCGAAGATGTGTGCAATGCATCACGACGAAACCTCTGATTTGCACGAAGTTGGGAGAATACTCTCGGAATCTATCGGGgtaagctgtccggacgacaaagtttagcttagtcacattctgatatcttttgtttttccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA