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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATATTAAATCAGATGCGCTGTGAAGAGAGTAACCCAGAAGACTTACTTCGCCAGTCCTTTCACCAATTTCAGTCTGATCGAAGCTTACCAATCCTTGAGgtataaattccactccttttgaaatgatcccgcgctataatagtctgaatgcag

Basic information

species Selaginella moellendorffii
transcript EFJ23732
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169049230|gb|FE459506.1|FE459506
EST:     GCCAGTCCTTTCACCAATTTCAGTCTGATCGAAGCTTACCAATCCTTGAG                         CAACGCGTGAAGAATCTGGAAGAAGAAAGAGCTTCTGTTCTTATTGAAGAA
genomic: GCCAGTCCTTTCACCAATTTCAGTCTGATCGAAGCTTACCAATCCTTGAGgtataaattc ... ctgaatgcagCAACGCGTGAAGAATCTGGAAGAAGAAAGAGCTTCTGTTCTTATTGAAGAA
EST: gi|169097393|gb|FE497159.1|FE497159
EST:     GCCAGTCCTTTCACCAATTTCAGTCTGATCGAAGCTTACCAATCCTTGAG                         CAACGCGTGAAGAATCTGGAAGAAGAAAGAGCTTCTGTTCTTATTGAAGAA
genomic: GCCAGTCCTTTCACCAATTTCAGTCTGATCGAAGCTTACCAATCCTTGAGgtataaattc ... ctgaatgcagCAACGCGTGAAGAATCTGGAAGAAGAAAGAGCTTCTGTTCTTATTGAAGAA
EST: gi|169077130|gb|FE484509.1|FE484509
EST:     GCCAGTCCTTTCACCAATTTCAGTCTGATCGAAGCTTACCAATCCTTGAG                         CAACGCGTGAAGAATCTGGAAGAAGAAAGAGCTTCTGTTCTTATTGAAGAA
genomic: GCCAGTCCTTTCACCAATTTCAGTCTGATCGAAGCTTACCAATCCTTGAGgtataaattc ... ctgaatgcagCAACGCGTGAAGAATCTGGAAGAAGAAAGAGCTTCTGTTCTTATTGAAGAA