1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TACGTGAAGCGCGAGGTGCTCTCCATACGTCATTCGCATGCTACAAGTTTCTGATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTGgtaagcttggactttcgagatcttcccgacgcttagcgcttttaatccag
species | Selaginella moellendorffii |
transcript | EFJ04362 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CTGATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTG GTTTGGGATTATAGCCTGCCAAATGGACTACATATTTATTGATGGCGTAGCEST: gi|169060230|gb|FE467592.1|FE467592
genomic: CTGATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTGgtaagcttgg ... tttaatccagGTTTGGGATTATAGCCTGCCAAATGGACTGCATATTTATTGATGGCGTAGC
EST: GCTTTGTTGTTATTG GTTTGGGATTATAGCCTGCCAAATGGACTACATATTTATTGATGGCGTAGCEST: gi|169023904|gb|FE436429.1|FE436429
genomic: GCTTTGTTGTTATTGgtaagcttgg ... tttaatccagGTTTGGGATTATAGCCTGCCAAATGGACTGCATATTTATTGATGGCGTAGC
EST: CTAATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTG GTTTGGGATTATAGCCTGCCAAATGGACTACATATTTATTGATGGCGTAGCEST: gi|169028546|gb|FE437257.1|FE437257
genomic: CTGATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTGgtaagcttgg ... tttaatccagGTTTGGGATTATAGCCTGCCAAATGGACTGCATATTTATTGATGGCGTAGC
EST: TCAAGCTTTGTTGTTATTG GTTGGGGATTATAGCCTGCCAAATGGACTACATATTTATTGATGGCGTAGCEST: gi|169099024|gb|FE501758.1|FE501758
genomic: TCAAGCTTTGTTGTTATTGgtaagcttgg ... tttaatccagGTTTGGGATTATAGCCTGCCAAATGGACTGCATATTTATTGATGGCGTAGC
EST: CTGATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTG GTTTGGGATTATAGCCTGCCAAATGGACTACATATTTATTGATGGCGTAGCEST: gi|169093587|gb|FE492345.1|FE492345
genomic: CTGATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTGgtaagcttgg ... tttaatccagGTTTGGGATTATAGCCTGCCAAATGGACTGCATATTTATTGATGGCGTAGC
EST: CTAATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTG GTTTGGGATTATAGCCTGCCAAATGGACTACATATTTATTGATGGCGTAGCEST: gi|169072876|gb|FE482322.1|FE482322
genomic: CTGATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTGgtaagcttgg ... tttaatccagGTTTGGGATTATAGCCTGCCAAATGGACTGCATATTTATTGATGGCGTAGC
EST: CTAATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTG GTTTGGGATTATAGCCTGCCAAATGGACTACATATTTATTGATGGCGTAGC
genomic: CTGATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTGgtaagcttgg ... tttaatccagGTTTGGGATTATAGCCTGCCAAATGGACTGCATATTTATTGATGGCGTAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACGTGAAGCGCGAGGTGCTCTCCATACGTCATTCGCATGCTACAAGTTTCTGATTATTTATGGCCTCCAGTTCTCAATATTCAAGCTTTGTTGTTATTGgtaagcttggactttcgagatcttcccgacgcttagcgcttttaatccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT