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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGAGTTTACGCGGGATCCATCCTTTGCTCCTTTTGCGAACCTTGGAGATGTGTTTGTGGCGTCATCCCGGCCATCTTTCGCTTCCATTTTCCGGATACAGgtataagtttttgtagaaaagtaatttttttctggctttcgttttcttacgcgtttgtttccag

Basic information

species Selaginella moellendorffii
transcript EFJ26212
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169058454|gb|FE466351.1|FE466351
EST:     TGTTTGTGGCGTCATCCCGGCCATCTTTCGCTTCCATTTTCCGGATACAG                         AGATGCCGATTGGCAAGACAACGATGGGGCATTGAACACGATATCACAGCT
genomic: TGTTTGTGGCGTCATCCCGGCCATCTTTCGCTTCCATTTTCCGGATACAGgtataagttt ... ttgtttccagAGATGCCGATTGGCAAGACAACGATGGGGCATTGAACACGATATCACAGCT
EST: gi|169058455|gb|FE466352.1|FE466352
EST:     TGTTTGTGGCGTCATCCCGGCCATCTTTCGCTTCCATTTTCCGGATACAG                         AGATGCCGATTGGCA
genomic: TGTTTGTGGCGTCATCCCGGCCATCTTTCGCTTCCATTTTCCGGATACAGgtataagttt ... ttgtttccagAGATGCCGATTGGCA
EST: gi|169058348|gb|FE466063.1|FE466063
EST:     TGTTTGTGGCGTCATCCCGGCCATCTTTCGCTTCCATTTTCCGGATACAG                         AGATGCCGATTGGCAAGACAACGATGGGGCATTGAACACGATATCACAGCT
genomic: TGTTTGTGGCGTCATCCCGGCCATCTTTCGCTTCCATTTTCCGGATACAGgtataagttt ... ttgtttccagAGATGCCGATTGGCAAGACAACGATGGGGCATTGAACACGATATCACAGCT