1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ACGCCAAACCTTTCGTCCAGAGTTTCTCAACCGGATCGACGAGTACATCGTGTTTAAGCCGCTGGACCGGGAACAGATCAACAAGATTGTCAAGCTACAGgtaaagtcgatcactttccatacctccttttgcgaagtttttaacgtgttctttgttgattttgccag
species | Selaginella moellendorffii |
transcript | EFJ23880 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TGTTTAAGCCGCTGGACCGGGAACAGATCAACAAGATTGTCAAGCTACAG CTTGCGAGAGTACAGCATAGACTGAAAGACCGGAAGATCAGCATGACGATCEST: gi|169051409|gb|FE459241.1|FE459241
genomic: TGTTTAAGCCGCTGGACCGGGAACAGATCAACAAGATTGTCAAGCTACAGgtaaagtcga ... attttgccagCTTGCGAGAGTACAGCATAGACTGAAAGACCGGAAGATCAGCATGACGATC
EST: TGTTTAAGCCGCTGGACCGGGAACAGATCAACAAGATTGTCAAGCTACAG CTTGCGAGAGTACAGCATAGACTGAAAGACCGGAAGATCAGCATGACGATC
genomic: TGTTTAAGCCGCTGGACCGGGAACAGATCAACAAGATTGTCAAGCTACAGgtaaagtcga ... attttgccagCTTGCGAGAGTACAGCATAGACTGAAAGACCGGAAGATCAGCATGACGATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACGCCAAACCTTTCGTCCAGAGTTTCTCAACCGGATCGACGAGTACATCGTGTTTAAGCCGCTGGACCGGGAACAGATCAACAAGATTGTCAAGCTACAGgtaaagtcgatcactttccatacctccttttgcgaagtttttaacgtgttctttgttgattttgccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT