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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTACGATGGTCGCAAACACGTTTGCATCGAAGGTGACCACATACTAAACGTCTTTTCGTTCTCCAAAGCCTACGGCATGATGGGATGGCGAATAGGATATgtaagaatctctacatcaaaaccattttttctctcctccttatcattgccttggtggtgttcacag

Basic information

species Selaginella moellendorffii
transcript EFJ17703
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ17703 (Selaginella moellendorffii), 5'ss of exon 7
lower sequence: Vv09s0002g05250.t01 (Vitis vinifera), 5'ss of exon 8
GTACGATGGTCGCAAACACGTTTGCATCGAAGGTGACCACATACTAAACGTCTTTTCGTTCTCCAAAGCCTACGGCATGATGGGATGGCGAATAGGATATgtaagaatctctacatcaaaaccattttttctctcctccttatcattgccttggtggtgttcacag-----------------------------------
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GTATGATGGTCTTAAGCACACATGTGTAGAGGGTGATCACATAGTGAACATTTTTTCCTTCTCAAAAGCCTATGGGATGATGGGATGGCGAGTTGGTTATgtaagtaatggtttctgattcctatttctatattcagtgtgaaaag-gccttgtttttttaaacaataaggtatgaaaatttgtgcttcattttgaatgga