1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTCCCGTGTATTATGTGGCTGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGGgtacgcaaacctttctgtccagaaaaaaaaaactattgctttaatttttatattttctcgtggattgcag
species | Selaginella moellendorffii |
transcript | EFJ10950 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGG ATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGCEST: gi|169076334|gb|FE485780.1|FE485780
genomic: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGGgtacgcaaac ... tggattgcagATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGC
EST: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGG ATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGCEST: gi|169068980|gb|FE477711.1|FE477711
genomic: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGGgtacgcaaac ... tggattgcagATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGC
EST: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGG ATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGCEST: gi|169068981|gb|FE477712.1|FE477712
genomic: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGGgtacgcaaac ... tggattgcagATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGC
EST: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGG ATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGCEST: gi|169113016|gb|FE514872.1|FE514872
genomic: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGGgtacgcaaac ... tggattgcagATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGC
EST: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGG ATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGCEST: gi|169095754|gb|FE498367.1|FE498367
genomic: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGGgtacgcaaac ... tggattgcagATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGC
EST: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGG ATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGC
genomic: TGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGGgtacgcaaac ... tggattgcagATTTGTATTGTCTTGGGAGTGCTGCTAATGCTTGTAGCTACTATTGGAGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCCCGTGTATTATGTGGCTGGCTGTTTACAAACCCAGAGTTTTCAGTCTTTCGTGGATGGCAAACTGGgtacgcaaacctttctgtccagaaaaaaaaaactattgctttaatttttatattttctcgtggattgcag
- - - - - - - - - - GCTGTT