1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAGCAAGGGATAGCAGTGCTAGTGGAGGCAACGAAAGCTTGTGCCAAGTCCATAGAATCTAACAAAGGAAAGCTTGTTGTGAAAGAGGCGGCTAGAGTGgtgagtccccaagagtttttttcttgcttctctcggtgtttgctcacgaattctccttgtcccag
species | Selaginella moellendorffii |
transcript | EFJ05288 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CCATAGAATCTAACAAAGGAAAGCTTGTTGTGAAAGAGGCGGCTAGAGTG GTGAGCGACTCGGACGATCGCCATCTTTTGGGACGGCTGAGTGAAGCAAACEST: gi|169106748|gb|FE506772.1|FE506772
genomic: CCATAGAATCTAACAAAGGAAAGCTTGTTGTGAAAGAGGCGGCTAGAGTGgtgagtcccc ... cttgtcccagGTGAGTGACTCGGACGATCGCCATCTTTTGGGACGGCTGAGTGAAGCAAAC
EST: CCATAGAATCTAACAAAGGAAAGCTTGTTGTGAAAGAGGCGGCTAGAGTG GTGAGTGACTCGGACGATCGCCATCTTTTGGGACGGCTGAGTGAAGCAAAC
genomic: CCATAGAATCTAACAAAGGAAAGCTTGTTGTGAAAGAGGCGGCTAGAGTGgtgagtcccc ... cttgtcccagGTGAGTGACTCGGACGATCGCCATCTTTTGGGACGGCTGAGTGAAGCAAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCAAGGGATAGCAGTGCTAGTGGAGGCAACGAAAGCTTGTGCCAAGTCCATAGAATCTAACAAAGGAAAGCTTGTTGTGAAAGAGGCGGCTAGAGTGgtgagtccccaagagtttttttcttgcttctctcggtgtttgctcacgaattctccttgtcccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG