1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCGTTGTGGAGCTGGTCGGCGATTACACCGTGTGTCGAGAAGGCGAAGCAATCTCGCCAGAAGCATCGCGGATACTTgtgagtcatcacaaaaaaccatcgcttctagcgctctaatgtttcttctttccttgcag
species | Selaginella moellendorffii |
transcript | EFJ38547 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CCGTGTGTCGAGAAGGCGAAGCAATCTCGCCAGAAGCATCGCGGATACTT AGGCTCTTGGGAGTGAAAATGGCTCCCTTTAGAATGAGCCTTTTGTGTCGCEST: gi|169051894|gb|FE459024.1|FE459024
genomic: CCGTGTGTCGAGAAGGCGAAGCAATCTCGCCAGAAGCATCGCGGATACTTgtgagtcatc ... ttccttgcagAGGCTCTTGGGAGTGAAAATGGCTCCCTTTAGAATGAGCCTTTTGTGTCGC
EST: CCGTGTGTCGAGAAGGCGAAGCAATCTCGCCAGAAGCATCGCGGATACTT AGGCTCTTGGGAGTGAAAATGGCTCCCTTTAGAATGAGCCTTTTGTGTCGC
genomic: CCGTGTGTCGAGAAGGCGAAGCAATCTCGCCAGAAGCATCGCGGATACTTgtgagtcatc ... ttccttgcagAGGCTCTTGGGAGTGAAAATGGCTCCCTTTAGAATGAGCCTTTTGTGTCGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGTTGTGGAGCTGGTCGGCGATTACACCGTGTGTCGAGAAGGCGAAGCAATCTCGCCAGAAGCATCGCGGATACTTgtgagtcatcacaaaaaaccatcgcttctagcgctctaatgtttcttctttccttgcag
- - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC