1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGCTTTTGGCGACGAGCTTCTCCACAATGGCAACGCTCTAGCATTGCTTCCAAAGAACGTCTTCCGAGACCTCGCCGTGGTTCTCATGCTACTCCACCAGgtaagaaagatcatcgttcttctcactatgaactatgatcttcgttcctggagctaaacttcccatcgtctcgcag
species | Selaginella moellendorffii |
transcript | EFJ36050 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CGAGACCTCGCCGTGGTTCTCATGCTACTCCACCAG TTTATTACGTTTGGATTCGCTTGCACGCCCTTGTACTTCGTGTGGGAGAAGEST: gi|169114269|gb|FE515804.1|FE515804
genomic: CGAGACCTCGCCGTGGTTCTCATGCTACTCCACCAGgtaagaaaga ... cgtctcgcagTTTATTACGTTTGGATTCGCTTGCACGCCCTTGTACTTCGTGTGGGAGAAG
EST: CAAAGAACGTCTTCCGAGACCTCGCCGTGGTTCTCATGCTACTCCACCAG TTTATTACGTTTGGATTCGCTTGCACGCCCTTGTACTTCGTGTGGGAGAAG
genomic: CAAAGAACGTCTTCCGAGACCTCGCCGTGGTTCTCATGCTACTCCACCAGgtaagaaaga ... cgtctcgcagTTTATTACGTTTGGATTCGCTTGCACGCCCTTGTACTTCGTGTGGGAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCTTTTGGCGACGAGCTTCTCCACAATGGCAACGCTCTAGCATTGCTTCCAAAGAACGTCTTCCGAGACCTCGCCGTGGTTCTCATGCTACTCCACCAGgtaagaaagatcatcgttcttctcactatgaactatgatcttcgttcctggagctaaacttcccatcgtctcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC