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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGTTTTTCTCCAACTATGTACCCTATTGAGATTAGATCAGCATCCAATGGTTCAAAAGCCTGTGGATCCAAGTCTGTTTATCCATCGTTTCACGGACCgtgagtattgttttctttgtcttgatgctcatctgatgttactcttcaaaaccgcag

Basic information

species Selaginella moellendorffii
transcript EFJ17728
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ17728 (Selaginella moellendorffii), 5'ss of exon 6
lower sequence: GLYMA16G03970.1 (Glycine max), 5'ss of exon 8
GCAGTTTTTCTCCAACTATGTACCCTATTGAGATTAGATCAGCATCCAATGGTTCAAAAGCCTGTGGATCCAAGTCTGTTTATCCATCGTTTCACGGACCgtgagtattgttttctt-tgtcttgatgctcatctgatgttactcttcaaaaccgcag------------------------------------------
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GCAGTTTTCTTGCAGCTTTGTCAAGTGTTAAGGCTTGGAGAGCACCCAATTGTTCAAAAGCCTGTTGATCCAAGTCTTTTTATTCATAGATATACCAAGAgtgagtgttttctttttacagctcagtttgtgtaagaggataactaaaatgtttggtgtataggataatctcattgtattgcaggatatataggttattt