1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
GATCTGGCAGTCGTAGTTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGGgtaagtcgtgaatccgacttcgtgcctgtcttatgttgatgcgatctag
species | Selaginella moellendorffii |
transcript | EFJ10973 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGG GCTGGACTCAACGCGATTGCCGAAGCACTTGGAATAGCGGCTGTGAAAGGAEST: gi|169052985|gb|FE460700.1|FE460700
genomic: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGGgtaagtcgtg ... tgcgatctagGCTGGACTCAACGCGATTGCCGAAGCACTTGGAATAGCGGCTGTGAAAGGA
EST: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGG GCTGGACTCAACGCGATTGCCGAAGCACTTGGAATAGCGGCTGTGAAAGGAEST: gi|169059437|gb|FE467540.1|FE467540
genomic: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGGgtaagtcgtg ... tgcgatctagGCTGGACTCAACGCGATTGCCGAAGCACTTGGAATAGCGGCTGTGAAAGGA
EST: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGG GCTGGACTCAACGCGATTGCCGAAGCTCTTGGAATAGCGGCTGTGAAAGGAEST: gi|169064218|gb|FE471573.1|FE471573
genomic: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGGgtaagtcgtg ... tgcgatctagGCTGGACTCAACGCGATTGCCGAAGCACTTGGAATAGCGGCTGTGAAAGGA
EST: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGG GCTGGACTCAACGCGATTGCCGAAGCTCTTGGAATAGCGGCTGTGAAAGGAEST: gi|169022442|gb|FE430795.1|FE430795
genomic: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGGgtaagtcgtg ... tgcgatctagGCTGGACTCAACGCGATTGCCGAAGCACTTGGAATAGCGGCTGTGAAAGGA
EST: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGG GCTGGACTCAACGCGATTGCCGAAGCACTTGGAATAGCGGCTGTGAAAGGA
genomic: TTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGGgtaagtcgtg ... tgcgatctagGCTGGACTCAACGCGATTGCCGAAGCACTTGGAATAGCGGCTGTGAAAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCTGGCAGTCGTAGTTCTTCTCATTCTGATACCTCTCCTGTCACCAAATTCGTCAAGAGGCGGGgtaagtcgtgaatccgacttcgtgcctgtcttatgttgatgcgatctag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG