1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGACAATTCTACGTCGAGGCTGTACATTGACATGCGTTGCGTAAACTATAGAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAGgtaatacagtcgaacaaacagcttaaggcctattgttattttacagacactgttatgcgcag
species | Selaginella moellendorffii |
transcript | EFJ30120 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAG GTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCAEST: gi|169061403|gb|FE470438.1|FE470438
genomic: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAGgtaatacagt ... ttatgcgcagGTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCA
EST: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAG GTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCAEST: gi|169055939|gb|FE465127.1|FE465127
genomic: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAGgtaatacagt ... ttatgcgcagGTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCA
EST: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAG GTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCAEST: gi|169040262|gb|FE448353.1|FE448353
genomic: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAGgtaatacagt ... ttatgcgcagGTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCA
EST: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAG GTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCAEST: gi|169040261|gb|FE448352.1|FE448352
genomic: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAGgtaatacagt ... ttatgcgcagGTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCA
EST: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAG GTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCAEST: gi|169055940|gb|FE465128.1|FE465128
genomic: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAGgtaatacagt ... ttatgcgcagGTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCA
EST: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAG GTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCA
genomic: GAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAGgtaatacagt ... ttatgcgcagGTCTTTGTGCCTTTCCAGTCGGAGATGTATGCGTCCACTCGAGATCCACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGACAATTCTACGTCGAGGCTGTACATTGACATGCGTTGCGTAAACTATAGAAGGCCTCTGATTGACGGGGGAAAGCATGGAGCCAAAGGTAGCGTTCAGgtaatacagtcgaacaaacagcttaaggcctattgttattttacagacactgttatgcgcag
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