1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTGTGTGGCAGAAGCCTGTGGATACGACTTGCTACGAGAGTCGAGAGCCTTTGACGCATCCTCCAATGTGCGACGATAGCATTGAAACCGACGCTGCTTGgtaagtcaccatattttcttgttctctcacggaactaaattgcttcggttgaaaag
species | Selaginella moellendorffii |
transcript | EFJ21402 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTGACGCATCCTCCAATGTGCGACGATAGCATTGAAACCGACGCTGCTTG GTACGTGCCAATCAGAGCGTGCATCGTTCCCCAGCCATACGGTGCGAAAGGEST: gi|169099299|gb|FE502098.1|FE502098
genomic: TTGACGCATCCTCCAATGTGCGACGATAGCATTGAAACCGACGCTGCTTGgtaagtcacc ... ggttgaaaagGTACGTGCCAATCAGAGCGTGCATCGTTCCCCAGCCATACGGTGCGAAAGG
EST: TTGACGCATCCTCCAATGTGCGACGATAGCATTGAAACCGACGCTGCTTG GTACGTGCCAATCAGAGCGTGCATCGTTCCCCAGCCATACGGTGCGAAAGGEST: gi|169080524|gb|FE488462.1|FE488462
genomic: TTGACGCATCCTCCAATGTGCGACGATAGCATTGAAACCGACGCTGCTTGgtaagtcacc ... ggttgaaaagGTACGTGCCAATCAGAGCGTGCATCGTTCCCCAGCCATACGGTGCGAAAGG
EST: TTGACGCATCCTCCAATGTGCGACGATAGCATTGAAACCGACGCTGCTTG GTACGTGCCAATCAGAGCGTGCATCGTTCCCCAGCCATACGGTGCGAAAGG
genomic: TTGACGCATCCTCCAATGTGCGACGATAGCATTGAAACCGACGCTGCTTGgtaagtcacc ... ggttgaaaagGTACGTGCCAATCAGAGCGTGCATCGTTCCCCAGCCATACGGTGCGAAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTGTGGCAGAAGCCTGTGGATACGACTTGCTACGAGAGTCGAGAGCCTTTGACGCATCCTCCAATGTGCGACGATAGCATTGAAACCGACGCTGCTTGgtaagtcaccatattttcttgttctctcacggaactaaattgcttcggttgaaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT