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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGTTTTTCTCCAACTATGTACCCTACTGAGATTAGATCAGCATCCAATGGTTCAAAAGCCTGTGGATCCAAGTCTGTTTATCCATCGTTTCACGGACCgtgagtattgttttctttgtcttgatgctcatctgatgttactcttcaaaaccgcag

Basic information

species Selaginella moellendorffii
transcript EFJ16257
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ16257 (Selaginella moellendorffii), 5'ss of exon 5
lower sequence: GLYMA16G03970.1 (Glycine max), 5'ss of exon 8
GCAGTTTTTCTCCAACTATGTACCCTACTGAGATTAGATCAGCATCCAATGGTTCAAAAGCCTGTGGATCCAAGTCTGTTTATCCATCGTTTCACGGACCgtgagtattgttttctt-tgtcttgatgctcatctgatgttactcttcaaaaccgcag------------------------------------------
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GCAGTTTTCTTGCAGCTTTGTCAAGTGTTAAGGCTTGGAGAGCACCCAATTGTTCAAAAGCCTGTTGATCCAAGTCTTTTTATTCATAGATATACCAAGAgtgagtgttttctttttacagctcagtttgtgtaagaggataactaaaatgtttggtgtataggataatctcattgtattgcaggatatataggttattt