1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CGCGGAAATTTTTCATCTATGTGCAGGACTATAACGAAGCGGATCCAAGGACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGCgtaggcttgttcattactttttttgtgcgtctattcaccatgctgttattcttcgtag
species | Selaginella moellendorffii |
transcript | EFJ11673 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ACTCACGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGC GCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGCEST: gi|169024779|gb|FE435471.1|FE435471
genomic: ACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGCgtaggcttgt ... ttcttcgtagGCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGC
EST: ACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGC GCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGCEST: gi|169038310|gb|FE445309.1|FE445309
genomic: ACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGCgtaggcttgt ... ttcttcgtagGCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGC
EST: ACTCACGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGC GCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGCEST: gi|169070711|gb|FE477310.1|FE477310
genomic: ACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGCgtaggcttgt ... ttcttcgtagGCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGC
EST: ACTCACGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGC GCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGCEST: gi|169093397|gb|FE492701.1|FE492701
genomic: ACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGCgtaggcttgt ... ttcttcgtagGCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGC
EST: ACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGC GCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGCEST: gi|169092638|gb|FE493658.1|FE493658
genomic: ACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGCgtaggcttgt ... ttcttcgtagGCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGC
EST: ACTCACGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGC GCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGC
genomic: ACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGCgtaggcttgt ... ttcttcgtagGCACTTTGGACTTGACGATAACACCATCGATTTTATTGGCCACTCACTGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCGGAAATTTTTCATCTATGTGCAGGACTATAACGAAGCGGATCCAAGGACTCAAGACGGCATGGATCTCAGTAGAGTAACGACCAAGGAGTTGTTCGCgtaggcttgttcattactttttttgtgcgtctattcaccatgctgttattcttcgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG