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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAACTTTTGCAGAGCAACTGTGGAGTGACCGTGCTTGATTTTACACCACGTTTTAGTGGTGATGGGCCTCCATACACTTGTCTCGACAGACTTAATCAGgtatattctatagtcgcttctattttcttttgctgattccagttatgtaatag

Basic information

species Selaginella moellendorffii
transcript EFJ38867
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169094619|gb|FE494545.1|FE494545
EST:     GTTTTAGTGGTGATGGGCCTCCATACACTTGTCTCGACAGACTTAATCAG                         ACTCCAAGTCCACCAGTTGCTGCGGGTGGAGGAAGAAAAGCACGGTGCTGC
genomic: GTTTTAGTGGTGATGGGCCTCCATACACTTGTCTCGACAGACTTAATCAGgtatattcta ... tatgtaatagACTCCAAGTCCACCAGTTGCTGCGGGTGGAGGAAGAAAAGCACGGTGCTGC
EST: gi|169113687|gb|FE514793.1|FE514793
EST:     GTTTTAGTGGTGATGGGCCTCCATACACTTGTCTCGACAGACTTAATCAG                         ACTCCAAGTCCACCAGTTGCTGCGGGTGGAGGAAGAAAAGCACGGTGCTGC
genomic: GTTTTAGTGGTGATGGGCCTCCATACACTTGTCTCGACAGACTTAATCAGgtatattcta ... tatgtaatagACTCCAAGTCCACCAGTTGCTGCGGGTGGAGGAAGAAAAGCACGGTGCTGC
EST: gi|169023451|gb|FE431388.1|FE431388
EST:     GTTTTAGTGGTGATGGGCCTCCATACACTTGTCTCGACAGACTTAATCAG                         ACTCCAAGTCCACCAGTTGCTGCGGGTGGAGGAAGAAAAGCACGGTGCTGC
genomic: GTTTTAGTGGTGATGGGCCTCCATACACTTGTCTCGACAGACTTAATCAGgtatattcta ... tatgtaatagACTCCAAGTCCACCAGTTGCTGCGGGTGGAGGAAGAAAAGCACGGTGCTGC
EST: gi|169046389|gb|FE457393.1|FE457393
EST:     GTTTTAGTGGTGATGGGCCTCCATACACTTGTCTCGACAGACTTAATCAG                         ACTCCAAGTCCACCAGTTGCTGCGGGTGGAGGAAGAAAAGCACGGTGCTGC
genomic: GTTTTAGTGGTGATGGGCCTCCATACACTTGTCTCGACAGACTTAATCAGgtatattcta ... tatgtaatagACTCCAAGTCCACCAGTTGCTGCGGGTGGAGGAAGAAAAGCACGGTGCTGC