1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTCGAGTGTGGCTTCCTTCTTTGTAAGCCGGGTCGACACTCTCGTTGATAAAAGGCTGAATGAGATTGGCACCGACGAGGCGCTCCAGCTGCGTGGCAAGgtgacgagacaaagtttttccttttcctgacttcctctctttgcgttcttcatgcag
species | Selaginella moellendorffii |
transcript | EFJ38347 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AAAGGCTGAATGAGATTGGCACCGACGAGGCGCTCCAGCTGCGTGGCAAG GCAGCCGTTGCACAGGCAGCTCTGGCTTTCCAACTTTACGAGAAGAAATTCEST: gi|169056637|gb|FE463862.1|FE463862
genomic: AAAGGCTGAATGAGATTGGCACCGACGAGGCGCTCCAGCTGCGTGGCAAGgtgacgagac ... cttcatgcagGCAGCCGTTGCACAGGCAGCTCTGGCTTTCCAACTTTACGAGAAGAAATTC
EST: AAAGGCTGAATGAGATTGGCACCGACGAGGCGCTCCAGCTGCGTGGCAAG GCAGCCGTTGCGCAGGCAGCTCTGGCTTTCCAACTTTACGAGAAGAAATTC
genomic: AAAGGCTGAATGAGATTGGCACCGACGAGGCGCTCCAGCTGCGTGGCAAGgtgacgagac ... cttcatgcagGCAGCCGTTGCACAGGCAGCTCTGGCTTTCCAACTTTACGAGAAGAAATTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCGAGTGTGGCTTCCTTCTTTGTAAGCCGGGTCGACACTCTCGTTGATAAAAGGCTGAATGAGATTGGCACCGACGAGGCGCTCCAGCTGCGTGGCAAGgtgacgagacaaagtttttccttttcctgacttcctctctttgcgttcttcatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC