1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CAACAAGAGTCTGCTAAGTTTGGTTCCTCGTCAAAGATCAAAAGCACTTGCATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAGgtagggaaaagagatgattcacaaggagagactgaatgcatctacttgcag
species | Selaginella moellendorffii |
transcript | EFJ26152 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAG GGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAGEST: gi|169046771|gb|FE455851.1|FE455851
genomic: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAGgtagggaaaa ... ctacttgcagGGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAG
EST: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAG GGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAGEST: gi|169034533|gb|FE444580.1|FE444580
genomic: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAGgtagggaaaa ... ctacttgcagGGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAG
EST: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAG GGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAGEST: gi|169095644|gb|FE497009.1|FE497009
genomic: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAGgtagggaaaa ... ctacttgcagGGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAG
EST: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAG GGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAGEST: gi|169025386|gb|FE436000.1|FE436000
genomic: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAGgtagggaaaa ... ctacttgcagGGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAG
EST: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAG GGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAGEST: gi|169111640|gb|FE513984.1|FE513984
genomic: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAGgtagggaaaa ... ctacttgcagGGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAG
EST: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAG GGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAG
genomic: CATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAGgtagggaaaa ... ctacttgcagGGGTCGAAATTGTCATAGCTACCCCGGGACGCCTCATCGACATGCTTGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAACAAGAGTCTGCTAAGTTTGGTTCCTCGTCAAAGATCAAAAGCACTTGCATTTATGGTGGAGCTCCAAAGGGACCTCAGATTCGTGACTTGCAAAGAGgtagggaaaagagatgattcacaaggagagactgaatgcatctacttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG