1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGGTGGAAAAATAATCCCGGGAGCCATGGACACTGCGGCGGCGAAGCACCTGGCTTCGGCCTATGGAGGAATGGCTCATCGTGTTGCGCTCATTGCCCAGgtacgttatagtttttctagctttggagtttcttcttcgcttatgagcgagtgatcctctcctttctccttcttttgtag
species | Selaginella moellendorffii |
transcript | EFJ08516 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGGCTTCGGCCTATGGAGGAATGGCTCATCGTGTTGCGCTCATTGCCCAG AACGAAGGTCTTGGAAAACGGCTGGCGCACGGCTATCCTTTCCTAGAGGCCEST: gi|169035995|gb|FE446701.1|FE446701
genomic: TGGCTTCGGCCTATGGAGGAATGGCTCATCGTGTTGCGCTCATTGCCCAGgtacgttata ... tcttttgtagAACGAAGGTCTTGGAAAACGGCTGGCGCACGGCTATCCTTACCTAGAGGCC
EST: TGGCTTCGGCCTATGGAGGAATGGCTCATCGTGTTGCGCTCATTGCCCAG AACGAAGGTCTTGGAAAACGGCTGGCGCACGGCTATCCTTACCTAGAGGCC
genomic: TGGCTTCGGCCTATGGAGGAATGGCTCATCGTGTTGCGCTCATTGCCCAGgtacgttata ... tcttttgtagAACGAAGGTCTTGGAAAACGGCTGGCGCACGGCTATCCTTACCTAGAGGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGGAAAAATAATCCCGGGAGCCATGGACACTGCGGCGGCGAAGCACCTGGCTTCGGCCTATGGAGGAATGGCTCATCGTGTTGCGCTCATTGCCCAGgtacgttatagtttttctagctttggagtttcttcttcgcttatgagcgagtgatcctctcctttctccttcttttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA