1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTATGGAGAGACTGCGCTGCATCTAGCAGCGAAGAATGGCTCCACCGACGCTTTGAAAGTACTCTTGAAGCACAACGCTCGCAAAGAAGCCAAGGCTCTGgtaagtttctatgcctcctccaatgtttacgtagactcaatgcttcttttttttcag
species | Selaginella moellendorffii |
transcript | EFJ38074 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTTTGAAAGTACTCTTGAAGCACAACGCGCGCAAAGAAGCCAAGGCTCTG AATGGAATGACGCCTTTGCACTTGGCTGTCTGGTCTTCCGTGAGAGCGCAAEST: gi|169075547|gb|FE482557.1|FE482557
genomic: CTTTGAAAGTACTCTTGAAGCACAACGCTCGCAAAGAAGCCAAGGCTCTGgtaagtttct ... tttttttcagAATGGAATGACGCCTTTGCACTTGGCTGTCTGGTCTTCCGTGAGAGCGCAA
EST: GCACAACGCGCGCAAAGAAGCCAAGGCTCTG AATGGAATGACGCCTTTGCACTTGGCTGTCTGGTCTTCCGTGAGAGCGCAA
genomic: GCACAACGCTCGCAAAGAAGCCAAGGCTCTGgtaagtttct ... tttttttcagAATGGAATGACGCCTTTGCACTTGGCTGTCTGGTCTTCCGTGAGAGCGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATGGAGAGACTGCGCTGCATCTAGCAGCGAAGAATGGCTCCACCGACGCTTTGAAAGTACTCTTGAAGCACAACGCTCGCAAAGAAGCCAAGGCTCTGgtaagtttctatgcctcctccaatgtttacgtagactcaatgcttcttttttttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC