1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTTCCAGCGCTTAAGGATTTCTCGACGTCTGGAAAGCCGATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCGgtacttttgttcttcgttctctgactatcaaggctttctgtaactttctctccacag
species | Selaginella moellendorffii |
transcript | EFJ33956 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCG GGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGATTAGACTGTACAGTTCEST: gi|169024035|gb|FE435143.1|FE435143
genomic: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCGgtacttttgt ... ctctccacagGGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGACTAGACTGTACAGTTC
EST: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCG GGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGACTAGACTGTACAGTTCEST: gi|169024036|gb|FE435144.1|FE435144
genomic: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCGgtacttttgt ... ctctccacagGGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGACTAGACTGTACAGTTC
EST: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCG GGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGACTAGACTGTACAGTTCEST: gi|169063023|gb|FE471129.1|FE471129
genomic: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCGgtacttttgt ... ctctccacagGGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGACTAGACTGTACAGTTC
EST: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCG GGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGACTAGACTGTACAGTTCEST: gi|169065635|gb|FE474849.1|FE474849
genomic: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCGgtacttttgt ... ctctccacagGGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGACTAGACTGTACAGTTC
EST: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCG GGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGATTAGACTGTACAGTTC
genomic: GATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCGgtacttttgt ... ctctccacagGGCTAAAGGATGGAGGACAAGAGCTTCTGGGCGGACTAGACTGTACAGTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCCAGCGCTTAAGGATTTCTCGACGTCTGGAAAGCCGATGTGGGGGACTTGCGCTGGACTTATTTTTCTAGCAGACCGAGCTACCGgtacttttgttcttcgttctctgactatcaaggctttctgtaactttctctccacag
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