1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCATgtaagctatccaactctcggacgcaaacacggcgaaagaaatggtttcactgattgggttgtcgtttatggcag
species | Selaginella moellendorffii |
transcript | EFJ31007 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCAT ACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACAEST: gi|169070433|gb|FE476798.1|FE476798
genomic: ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCATgtaagctatc ... tttatggcagACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACA
EST: ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCAT ACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACAEST: gi|169035239|gb|FE442604.1|FE442604
genomic: ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCATgtaagctatc ... tttatggcagACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACA
EST: GGGACGCCAAATTCCAT ACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACAEST: gi|169104740|gb|FE508988.1|FE508988
genomic: GGGACGCCAAATTCCATgtaagctatc ... tttatggcagACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACA
EST: ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCAT ACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACAEST: gi|169092867|gb|FE496331.1|FE496331
genomic: ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCATgtaagctatc ... tttatggcagACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACA
EST: GGGACGCCAAATTCCAT ACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACAEST: gi|169061542|gb|FE469329.1|FE469329
genomic: GGGACGCCAAATTCCATgtaagctatc ... tttatggcagACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACA
EST: ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCAT ACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACA
genomic: ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCATgtaagctatc ... tttatggcagACACGATGATGAAGTTTACATGCTTTGAGGCCACAGTCGAGGCGCTTTACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTTACAGAGGACTGGTACCTCTCTGGGGACGCCAAATTCCATgtaagctatccaactctcggacgcaaacacggcgaaagaaatggtttcactgattgggttgtcgtttatggcag
- - - AGAGGA