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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGCAAGGACAGATACAGTGTTGTGATGAAGTTTGAGGATCAGATCTCTGCCGATGAGTTCTTCAGGCATTTCAACGGGCGACCATTTTCATCACTTCAGgtgagagatagaaataaaatcgatggcgcatgacttgaatttcttcttctccag

Basic information

species Selaginella moellendorffii
transcript EFJ27730
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169045105|gb|FE452808.1|FE452808
EST:     CATTTTCATCACTTCAG                         GAACAAATTTGTCATGTTCTTTTTGTAGCTGATGTTCAATACACTTCTTCC
genomic: CATTTTCATCACTTCAGgtgagagata ... tcttctccagGAACAAATTTGTCATGTTCTTTTTGTAGCTGATGTTCAATACACTTCTTCC
EST: gi|169075916|gb|FE482835.1|FE482835
EST:     CCGATGAGTTCTTCAGGCATTTCAACGGGCGACCATTTTCATCACTTCAG                         GAACAAATTTGTCATGTTCTTTTTGTAGCTGATGTTCAATACACTTCTTCC
genomic: CCGATGAGTTCTTCAGGCATTTCAACGGGCGACCATTTTCATCACTTCAGgtgagagata ... tcttctccagGAACAAATTTGTCATGTTCTTTTTGTAGCTGATGTTCAATACACTTCTTCC