1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACGgtagcttctctcttctttttttttttttaatttcttcgttctagctagctccctgaatctttcttcgttttctctttggatcatttcggactgactttgggattttgatcaatgcag
species | Selaginella moellendorffii |
transcript | EFJ25939 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACG TGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAGEST: gi|169039534|gb|FE449924.1|FE449924
genomic: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACGgtagcttctc ... atcaatgcagTGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAG
EST: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACG TGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAGEST: gi|169075643|gb|FE482029.1|FE482029
genomic: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACGgtagcttctc ... atcaatgcagTGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAG
EST: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACG TGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAGEST: gi|169075642|gb|FE482028.1|FE482028
genomic: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACGgtagcttctc ... atcaatgcagTGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAG
EST: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACG TGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAGEST: gi|169048646|gb|FE454476.1|FE454476
genomic: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACGgtagcttctc ... atcaatgcagTGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAG
EST: TACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACG TGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAGEST: gi|169039535|gb|FE449925.1|FE449925
genomic: TACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACGgtagcttctc ... atcaatgcagTGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAG
EST: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACG TGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAG
genomic: ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACGgtagcttctc ... atcaatgcagTGTTGTGGCGACAGCGATCGCATATTTCCGACGGGTTTACACCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACATAAAGAAATTGGCACAGCGTGCAAAAGTTCGCCAACGgtagcttctctcttctttttttttttttaatttcttcgttctagctagctccctgaatctttcttcgttttctctttggatcatttcggactgactttgggattttgatcaatgcag
- - AAAGAA
- - AAGAAA