1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ATATAAGAGAGCTTGTTCCTCTGGAGGATGTGATGGAAGAATTTAACTATGGACCAAACGGAGGCCTCATCTATTGCATGGAgtaagatttcagtagagctttcgtggtgttagtttctactcaaggattcctggctgaccacttctagtgtag
species | Selaginella moellendorffii |
transcript | EFJ18832 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATGGAAGAATTTAACTATGGACCAAACGGAGGCCTCATCTATTGCATGGA ATATCTTGAAGAAAATATGGACGACTGGCTTGCGGAGAAACTAGAAGACTAEST: gi|169057119|gb|FE464149.1|FE464149
genomic: ATGGAAGAATTTAACTATGGACCAAACGGAGGCCTCATCTATTGCATGGAgtaagatttc ... tctagtgtagATATCTTGAAGAAAATATGGACGACTGGCTTGCGGAGAAACTAGAAGACTA
EST: GACCAAACGGAGGCCTCATCTATTGCATGGA ATATCTTGAGGAGAATATGGACGACTGGCTTGCAGAGAAACTAGAAGACTAEST: gi|169057120|gb|FE464150.1|FE464150
genomic: GACCAAACGGAGGCCTCATCTATTGCATGGAgtaagatttc ... tctagtgtagATATCTTGAAGAAAATATGGACGACTGGCTTGCGGAGAAACTAGAAGACTA
EST: ATGGAAGAATTTAACTATGGACCAAACGGAGGCCTCATCTATTGCATGGA ATATCTTGAGGAGAATATGGACGACTGGCTTGCAGAGAAACTAGAAGACTA
genomic: ATGGAAGAATTTAACTATGGACCAAACGGAGGCCTCATCTATTGCATGGAgtaagatttc ... tctagtgtagATATCTTGAAGAAAATATGGACGACTGGCTTGCGGAGAAACTAGAAGACTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATAAGAGAGCTTGTTCCTCTGGAGGATGTGATGGAAGAATTTAACTATGGACCAAACGGAGGCCTCATCTATTGCATGGAgtaagatttcagtagagctttcgtggtgttagtttctactcaaggattcctggctgaccacttctagtgtag
- - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA