1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGCCCCGACAAGCTGCCGAATTACGAGCACAAAATCAAGACCTTCTACGAGGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTGgtactaaaatcgcgatttctcttgagagctttacttgtttcattctttcttgtggcag
species | Selaginella moellendorffii |
transcript | EFJ15864 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGAGCACATCCACACTGACGAAGAAATTCGCTACTGTCTGGACGGAAGTG GCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATCTGGGTCGEST: gi|169098079|gb|FE496913.1|FE496913
genomic: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTGgtactaaaat ... cttgtggcagGCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCG
EST: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTG GCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCGEST: gi|169069501|gb|FE480572.1|FE480572
genomic: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTGgtactaaaat ... cttgtggcagGCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCG
EST: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTG GCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCGEST: gi|169106689|gb|FE506739.1|FE506739
genomic: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTGgtactaaaat ... cttgtggcagGCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCG
EST: GGAGCACATCCACACTGACGAAGAAATTCGCTACTGTCTGGACGGAAGTG GCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATCTGGGTCGEST: gi|169033272|gb|FE441292.1|FE441292
genomic: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTGgtactaaaat ... cttgtggcagGCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCG
EST: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTG GCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCGEST: gi|169098080|gb|FE496914.1|FE496914
genomic: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTGgtactaaaat ... cttgtggcagGCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCG
EST: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTG GCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCGEST: gi|169069500|gb|FE480571.1|FE480571
genomic: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTGgtactaaaat ... cttgtggcagGCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCG
EST: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTG GCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCG
genomic: GGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTGgtactaaaat ... cttgtggcagGCTACTTTGATGTGCGAGACTCCGATGATCGCTGGATCCGGATATGGGTCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCCCCGACAAGCTGCCGAATTACGAGCACAAAATCAAGACCTTCTACGAGGAGCACATCCACACTGACGAAGAGATTCGCTACTGTCTCGACGGAAGTGgtactaaaatcgcgatttctcttgagagctttacttgtttcattctttcttgtggcag
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA