1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ACCTCCAACATCGTTTATTCAGGCTGGACATTCTCAACAGTCAAGTGAATCCCAATCGGGCTCCGAGCAATCGCCTGATAGTTCCTACGCTGATTGGCAGgtaacgaagagtttatttcttggaaggattttaacgcgacttcttacag
species | Selaginella moellendorffii |
transcript | EFJ15634 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCCAATCGGGCTCCGAGCAATCGCCTGATAGTTCCTACGCTGATTGGCAG GAGCGAACGGGAAGGATATCTTTTAAGCTGTTTGACAGGAATCCTGGTGATEST: gi|169030797|gb|FE438143.1|FE438143
genomic: CCCAATCGGGCTCCGAGCAATCGCCTGATAGTTCCTACGCTGATTGGCAGgtaacgaaga ... cttcttacagGAGCGAACGGGAAGGATATCTTTTAAGCTGTTTGACAGGAATCCTGGTGAT
EST: GCCTGATAGTTCCTACGCTGATTGGCAG GAGCGAACGGGAAGGATATCTTTTAAGCTGTTTGACAGGAATCCTGGTGATEST: gi|169103571|gb|FE507613.1|FE507613
genomic: GCCTGATAGTTCCTACGCTGATTGGCAGgtaacgaaga ... cttcttacagGAGCGAACGGGAAGGATATCTTTTAAGCTGTTTGACAGGAATCCTGGTGAT
EST: CCCAATCGGGCTCCGAGCAATCGCCTGATAGTTCCTACGCTGATTGGCAG GAGCGAACGGGAAGGATATCTTTTAAGCTGTTTGACAGGAATCCTGGTGATEST: gi|169037499|gb|FE445538.1|FE445538
genomic: CCCAATCGGGCTCCGAGCAATCGCCTGATAGTTCCTACGCTGATTGGCAGgtaacgaaga ... cttcttacagGAGCGAACGGGAAGGATATCTTTTAAGCTGTTTGACAGGAATCCTGGTGAT
EST: CCCAATCGGGCTCCGAGCAATCGCCTGATAGTTCCTACGCTGATTGGCAG GAGCGAACGGGAAGGATATCTTTTAAGCTGTTTGACAGGAATCCTGGTGAT
genomic: CCCAATCGGGCTCCGAGCAATCGCCTGATAGTTCCTACGCTGATTGGCAGgtaacgaaga ... cttcttacagGAGCGAACGGGAAGGATATCTTTTAAGCTGTTTGACAGGAATCCTGGTGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTCCAACATCGTTTATTCAGGCTGGACATTCTCAACAGTCAAGTGAATCCCAATCGGGCTCCGAGCAATCGCCTGATAGTTCCTACGCTGATTGGCAGgtaacgaagagtttatttcttggaaggattttaacgcgacttcttacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT