1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' |
GTTTGCGCTGGATTCTCCGTTACGCGCCACTCTCTTGAAACTGGGAATTAAGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAAgtaagtgtttcctttccatttgtgtgttttgatcttgtaattctattggcag
species | Selaginella moellendorffii |
transcript | EFJ31523 |
intron # | 22 |
splice site | 5' |
intron type | U2 |
EST: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAA GTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGTEST: gi|169108451|gb|FE510445.1|FE510445
genomic: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAAgtaagtgttt ... ctattggcagGTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGT
EST: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAA GTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGTEST: gi|169055982|gb|FE466171.1|FE466171
genomic: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAAgtaagtgttt ... ctattggcagGTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGT
EST: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAA GTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGTEST: gi|169088452|gb|FE495498.1|FE495498
genomic: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAAgtaagtgttt ... ctattggcagGTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGT
EST: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAA GTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGTEST: gi|169106117|gb|FE507935.1|FE507935
genomic: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAAgtaagtgttt ... ctattggcagGTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGT
EST: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAA GTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGT
genomic: AGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAAgtaagtgttt ... ctattggcagGTAACGAAACTAGTGAAAGACGGAGCCAAGAAAATAACTTTAAGCATTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTGCGCTGGATTCTCCGTTACGCGCCACTCTCTTGAAACTGGGAATTAAGTGCAAGGCTGTTGTGTGCTGTCGAGTTTCTCCATTGCAGAAAGCTCAAgtaagtgtttcctttccatttgtgtgttttgatcttgtaattctattggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA