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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACGTGATCCCTCCAAGAGACTAGGAGGTTTAAACGGAGCATACGAAATCAAGCGACATCCTTTCTTCACCGGTATCAACTGGCCTCTCATACGCTGCATGgttcgtttcttccttctccttgaaaaatcgacgaagaactaactgggtttgattctatag

Basic information

species Selaginella moellendorffii
transcript EFJ27458
intron # 22
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169108086|gb|FE511029.1|FE511029
EST:     AGCGACATCCTTTCTTCACCGGTATCAACTGGCCTCTCATACGCTGCATG                         CCGGCGCCAGAGCTCGACACTCCAATCCAATTCATTGACAAAAACGCAGAA
genomic: AGCGACATCCTTTCTTCACCGGTATCAACTGGCCTCTCATACGCTGCATGgttcgtttct ... gattctatagCCGGCGCCAGAGCTCGACACTCCAATCCAATTCATTGACAAAAACGCAGAA
EST: gi|169095350|gb|FE496741.1|FE496741
EST:     AGCGACATCCTTTCTTCACCGGTATCAACTGGCCTCTCATACGCTGCATG                         CCGGCGCCAGAGCTCGACACTCCAATCCAATTCATTGACAAAAACGCAGAA
genomic: AGCGACATCCTTTCTTCACCGGTATCAACTGGCCTCTCATACGCTGCATGgttcgtttct ... gattctatagCCGGCGCCAGAGCTCGACACTCCAATCCAATTCATTGACAAAAACGCAGAA
EST: gi|169086889|gb|FE496151.1|FE496151
EST:     AGCGACATCCTTTCTTCACCGGTATCAACTGGCCTCTCATACGCTGCATG                         CCGGCGCCAGAGCTCGACACTCCAATCCAATTCATTGACAAAAACGCAGAA
genomic: AGCGACATCCTTTCTTCACCGGTATCAACTGGCCTCTCATACGCTGCATGgttcgtttct ... gattctatagCCGGCGCCAGAGCTCGACACTCCAATCCAATTCATTGACAAAAACGCAGAA
EST: gi|169080013|gb|FE487899.1|FE487899
EST:     AGCGACATCCTTTCTTCACCGGTATCAACTGGCCTCTCATACGCTGCATG                         CCGGCGCCAGAGCTCGACACTCCAATCCAATTCATTGACAAAAACGCAGAA
genomic: AGCGACATCCTTTCTTCACCGGTATCAACTGGCCTCTCATACGCTGCATGgttcgtttct ... gattctatagCCGGCGCCAGAGCTCGACACTCCAATCCAATTCATTGACAAAAACGCAGAA