1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
CACTGGGTTTCCCTTAAAATTGTCCGTGTGGCTCATGGAGAGTAGGCTCTTTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAGgtatcttacaaatatatatttcttttcctttattttttttctttcttggtttcgtttggcag
species | Selaginella moellendorffii |
transcript | EFJ32727 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAG GTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTACEST: gi|169058240|gb|FE466007.1|FE466007
genomic: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAGgtatcttaca ... cgtttggcagGTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTAC
EST: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAG GTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTACEST: gi|169100954|gb|FE500594.1|FE500594
genomic: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAGgtatcttaca ... cgtttggcagGTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTAC
EST: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAG GTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTACEST: gi|169020347|gb|FE428318.1|FE428318
genomic: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAGgtatcttaca ... cgtttggcagGTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTAC
EST: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAG GTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTACEST: gi|169026087|gb|FE432944.1|FE432944
genomic: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAGgtatcttaca ... cgtttggcagGTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTAC
EST: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAG GTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTAC
genomic: TTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAGgtatcttaca ... cgtttggcagGTATTTGATGGCATAGATATTCCAGATGGGCCAATGTTCCTTCCAGAGTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACTGGGTTTCCCTTAAAATTGTCCGTGTGGCTCATGGAGAGTAGGCTCTTTGGTGGGATTCTATACAAGCACTTGCTCAAGACCAATGGGGTGTCAAAGgtatcttacaaatatatatttcttttcctttattttttttctttcttggtttcgtttggcag
- - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG